Theodosius Dobzhansky Center
for Genome Bioinformatics

Research Project Portals

Top staff

Senior Staff

Staff

Administrative Staff

Post Doctorials

Eugeny Bakin

Senior Fellows

Former staff

Alexey Makunin
Alla Lapidus
Andrei Yurchenko
Elizaveta Lutsenko
Guan Li
Kirill Grigoriev
Maria Chirkova
Michail Raiko
Nesli Avgan
Olga Bajenova
Valentina Melnikova
Vladimir Krasikov

Theodosius Dobzhansky

Geneticist & Evolutionary Biologist

Theodosius Dobzhansky American geneticist and evolutionary biologist and a central figure in the field of evolutionary biology is recognized for...

More...

Stephen J O'Brien

Chief Scientific Officer

I welcome you to the Site of the brand new Center of Genome Informatics at St Petersburg State University. The...

More...

Vladimir Brukhin

Leading researcher, Deputy Director

Vladimir BrukhinÂ Â Â Leading researcher, Deputy DirectorÂ Joined the Theodosius Dobzhansky Center for Genome Bioinformatics in February 2013 right after returning...

More...

Lab's news

SPBU on web site published an article about achievement of the Center and published article.

More...

September, 27 2019 ( Friday at 2pm: Dr. Kirill Vinnikov from Hawaii University (USA) and head of the lab at the Far Eastern Federal University (Vladivostok) "Exome sequencing of non-model species"

More...

Conferences

Here is an announces of incoming Conferences and Meetings on Genomics and Bioinformatics

More...

Joomla! Debug Console

Session

{
    "__default": {
        "session": {
            "counter": 1,
            "timer": {
                "start": 1653732929,
                "last": 1653732929,
                "now": 1653732929
            },
            "client": {
                "forwarded": "3.236.97.59"
            },
            "token": "MUICCdFz7oklpEHD7iwt3O7z0uHdrqp1"
        },
        "registry": {},
        "user": {
            "id": 0,
            "name": null,
            "username": null,
            "email": null,
            "password": null,
            "password_clear": "",
            "block": null,
            "sendEmail": 0,
            "registerDate": null,
            "lastvisitDate": null,
            "activation": null,
            "params": null,
            "groups": [],
            "guest": 1,
            "lastResetTime": null,
            "resetCount": null,
            "requireReset": null,
            "aid": 0
        },
        "plg_system_languagefilter": {
            "language": "en-GB"
        }
    }
}

Profile Information

Time

Memory

Time: 1.88 ms / 1.88 ms Memory: 0.480 MB / 0.85 MB Application: afterLoad

Time: 26.25 ms / 28.12 ms Memory: 1.522 MB / 2.37 MB Application: afterInitialise

Time: 6.49 ms / 34.62 ms Memory: 0.228 MB / 2.60 MB Application: afterRoute

Time: 2.48 ms / 37.10 ms Memory: 0.112 MB / 2.71 MB Application: beforeRenderComponent com_content

Time: 1.12 ms / 38.22 ms Memory: 0.052 MB / 2.76 MB Application: Before Access::preloadComponents (all components)

Time: 1.15 ms / 39.37 ms Memory: 0.054 MB / 2.82 MB Application: After Access::preloadComponents (all components)

Time: 0.04 ms / 39.41 ms Memory: 0.000 MB / 2.81 MB Application: Before Access::getAssetRules (id:8 name:com_content)

Time: 0.24 ms / 39.64 ms Memory: 0.009 MB / 2.82 MB Application: After Access::getAssetRules (id:8 name:com_content)

Time: 105.91 ms / 145.55 ms Memory: 2.943 MB / 5.76 MB Application: afterRenderComponent com_content

Time: 32.81 ms / 178.36 ms Memory: 0.106 MB / 5.87 MB Application: afterDispatch

Time: 19.13 ms / 197.49 ms Memory: 0.487 MB / 6.36 MB Application: beforeRenderModule mod_custom (Mail us)

Time: 0.53 ms / 198.02 ms Memory: 0.005 MB / 6.36 MB Application: afterRenderModule mod_custom (Mail us)

Time: 0.05 ms / 198.07 ms Memory: 0.000 MB / 6.36 MB Application: beforeRenderModule mod_custom (Copyright)

Time: 0.09 ms / 198.16 ms Memory: 0.003 MB / 6.37 MB Application: afterRenderModule mod_custom (Copyright)

Time: 0.05 ms / 198.21 ms Memory: 0.000 MB / 6.36 MB Application: beforeRenderModule mod_custom (content-bottom)

Time: 0.10 ms / 198.30 ms Memory: 0.003 MB / 6.37 MB Application: afterRenderModule mod_custom (content-bottom)

Time: 0.04 ms / 198.35 ms Memory: 0.000 MB / 6.37 MB Application: beforeRenderModule mod_custom (Lab's news )

Time: 0.09 ms / 198.43 ms Memory: 0.004 MB / 6.37 MB Application: afterRenderModule mod_custom (Lab's news )

Time: 0.02 ms / 198.46 ms Memory: 0.000 MB / 6.37 MB Application: beforeRenderModule mod_login (login)

Time: 1.21 ms / 199.67 ms Memory: 0.021 MB / 6.39 MB Application: afterRenderModule mod_login (login)

Time: 0.03 ms / 199.70 ms Memory: 0.000 MB / 6.39 MB Application: beforeRenderModule mod_custom (Conferences)

Time: 0.09 ms / 199.79 ms Memory: 0.003 MB / 6.40 MB Application: afterRenderModule mod_custom (Conferences)

Time: 0.05 ms / 199.84 ms Memory: 0.000 MB / 6.40 MB Application: beforeRenderModule mod_custom (Dobzhansky)

Time: 0.11 ms / 199.94 ms Memory: 0.003 MB / 6.40 MB Application: afterRenderModule mod_custom (Dobzhansky)

Time: 0.02 ms / 199.97 ms Memory: 0.000 MB / 6.40 MB Application: beforeRenderModule mod_custom (Dr Stephen O'Brien)

Time: 0.08 ms / 200.05 ms Memory: 0.003 MB / 6.40 MB Application: afterRenderModule mod_custom (Dr Stephen O'Brien)

Time: 0.03 ms / 200.08 ms Memory: 0.000 MB / 6.40 MB Application: beforeRenderModule mod_custom (Deputy)

Time: 0.09 ms / 200.17 ms Memory: 0.003 MB / 6.40 MB Application: afterRenderModule mod_custom (Deputy)

Time: 0.05 ms / 200.22 ms Memory: 0.014 MB / 6.42 MB Application: beforeRenderModule mod_custom (GR-portal)

Time: 1.90 ms / 202.12 ms Memory: 0.024 MB / 6.44 MB Application: afterRenderModule mod_custom (GR-portal)

Time: 0.03 ms / 202.15 ms Memory: 0.000 MB / 6.44 MB Application: beforeRenderModule mod_custom (GWATCH-portal)

Time: 0.08 ms / 202.23 ms Memory: 0.003 MB / 6.44 MB Application: afterRenderModule mod_custom (GWATCH-portal)

Time: 0.02 ms / 202.25 ms Memory: 0.000 MB / 6.44 MB Application: beforeRenderModule mod_custom (GMTVdb)

Time: 0.08 ms / 202.33 ms Memory: 0.005 MB / 6.45 MB Application: afterRenderModule mod_custom (GMTVdb)

Time: 0.02 ms / 202.35 ms Memory: 0.000 MB / 6.45 MB Application: beforeRenderModule mod_custom (Project _3)

Time: 0.08 ms / 202.43 ms Memory: 0.003 MB / 6.45 MB Application: afterRenderModule mod_custom (Project _3)

Time: 0.04 ms / 202.47 ms Memory: 0.000 MB / 6.45 MB Application: beforeRenderModule mod_custom (Research Project Portals)

Time: 0.07 ms / 202.54 ms Memory: 0.003 MB / 6.45 MB Application: afterRenderModule mod_custom (Research Project Portals)

Time: 0.04 ms / 202.58 ms Memory: 0.000 MB / 6.45 MB Application: beforeRenderModule mod_menu (Main menu en-GB)

Time: 8.62 ms / 211.21 ms Memory: 0.161 MB / 6.62 MB Application: afterRenderModule mod_menu (Main menu en-GB)

Time: 0.05 ms / 211.26 ms Memory: 0.004 MB / 6.62 MB Application: beforeRenderModule mod_custom (LogoE)

Time: 0.09 ms / 211.35 ms Memory: 0.003 MB / 6.62 MB Application: afterRenderModule mod_custom (LogoE)

Time: 0.08 ms / 211.43 ms Memory: 0.003 MB / 6.63 MB Application: beforeRenderModule mod_languages (Language Switcher)

Time: 1.26 ms / 212.69 ms Memory: 0.020 MB / 6.65 MB Application: afterRenderModule mod_languages (Language Switcher)

Time: 0.03 ms / 212.72 ms Memory: 0.000 MB / 6.64 MB Application: beforeRenderModule mod_custom (SPBUlogo)

Time: 0.09 ms / 212.81 ms Memory: 0.003 MB / 6.65 MB Application: afterRenderModule mod_custom (SPBUlogo)

Time: 128.04 ms / 340.85 ms Memory: 1.805 MB / 8.45 MB Application: afterRender

Database queries total: 144.02 ms

Memory Usage

Database Queries

312 Queries Logged 144.02 ms

73 duplicate found!

21 duplicates: #17 #22 #25 #31 #34 #43 #46 #65 #68 #75 #78 #83 #86 #99 #102 #160 #168 #176 #183 #191 #197

13 duplicates: #23 #32 #44 #66 #76 #84 #100 #158 #166 #174 #181 #189 #198

13 duplicates: #24 #33 #45 #67 #77 #85 #101 #159 #167 #175 #182 #190 #199

2 duplicates: #118 #138

2 duplicates: #122 #157

3 duplicates: #128 #131 #134

3 duplicates: #129 #132 #135

3 duplicates: #130 #133 #136

9 duplicates: #148 #149 #150 #151 #152 #153 #154 #155 #156

2 duplicates: #205 #304

2 duplicates: #207 #305

Query Time: 0.52 ms Query memory: 0.025 MB Memory before query: 1.195 MB Rows returned: 0

SELECT `data`

  FROM `joo_session`

  WHERE `session_id` = '92vv6qc97v5l9dqiocttlsue3a'

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_session	NULL	const	PRIMARY	PRIMARY	766	const	1	100.00	NULL

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
16	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1730
15	JDatabaseDriver->loadResult()	JROOT/libraries/joomla/session/storage/database.php:45
14	JSessionStorageDatabase->read()	Same as call in the line below.
13	session_start()	JROOT/libraries/joomla/session/handler/native.php:260
12	JSessionHandlerNative->doSessionStart()	JROOT/libraries/joomla/session/handler/native.php:50
11	JSessionHandlerNative->start()	JROOT/libraries/joomla/session/handler/joomla.php:88
10	JSessionHandlerJoomla->start()	JROOT/libraries/src/Session/Session.php:660
9	Joomla\CMS\Session\Session->_start()	JROOT/libraries/src/Session/Session.php:620
8	Joomla\CMS\Session\Session->start()	JROOT/libraries/src/Session/Session.php:498
7	Joomla\CMS\Session\Session->get()	JROOT/libraries/src/Session/Session.php:455
6	Joomla\CMS\Session\Session->isNew()	JROOT/libraries/src/Application/CMSApplication.php:755
5	Joomla\CMS\Application\CMSApplication->loadSession()	JROOT/libraries/src/Application/CMSApplication.php:134
4	Joomla\CMS\Application\CMSApplication->__construct()	JROOT/libraries/src/Application/SiteApplication.php:66
3	Joomla\CMS\Application\SiteApplication->__construct()	JROOT/libraries/src/Application/CMSApplication.php:343
2	Joomla\CMS\Application\CMSApplication::getInstance()	JROOT/libraries/src/Factory.php:140
1	Joomla\CMS\Factory::getApplication()	JROOT/index.php:46

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.22 ms After last query: 0.31 ms Query memory: 0.022 MB Memory before query: 1.211 MB Rows returned: 0

SELECT `session_id`

  FROM `joo_session`

  WHERE `session_id` = '92vv6qc97v5l9dqiocttlsue3a' 
  LIMIT 1

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_session	NULL	const	PRIMARY	PRIMARY	766	const	1	100.00	Using index

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
9	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1730
8	JDatabaseDriver->loadResult()	JROOT/libraries/src/Session/MetadataManager.php:74
7	Joomla\CMS\Session\MetadataManager->createRecordIfNonExisting()	JROOT/libraries/src/Application/CMSApplication.php:152
6	Joomla\CMS\Application\CMSApplication->checkSession()	JROOT/libraries/src/Application/CMSApplication.php:757
5	Joomla\CMS\Application\CMSApplication->loadSession()	JROOT/libraries/src/Application/CMSApplication.php:134
4	Joomla\CMS\Application\CMSApplication->__construct()	JROOT/libraries/src/Application/SiteApplication.php:66
3	Joomla\CMS\Application\SiteApplication->__construct()	JROOT/libraries/src/Application/CMSApplication.php:343
2	Joomla\CMS\Application\CMSApplication::getInstance()	JROOT/libraries/src/Factory.php:140
1	Joomla\CMS\Factory::getApplication()	JROOT/index.php:46

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 1.25 ms After last query: 0.08 ms Query memory: 0.004 MB Memory before query: 1.216 MB

INSERT INTO `joo_session`
(`session_id`,`guest`,`time`,`userid`,`username`,`client_id`) 
  VALUES 
('92vv6qc97v5l9dqiocttlsue3a', 1, '1653732929', 0, '', 0)

Explain

EXPLAIN not possible on query: INSERT INTO `joo_session` (`session_id`,`guest`,`time`,`userid`,`username`,`client_id`) VALUES ('92vv6qc97v5l9dqiocttlsue3a', 1, '1653732929', 0, '', 0)

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
8	JDatabaseDriverMysqli->execute()	JROOT/libraries/src/Session/MetadataManager.php:116
7	Joomla\CMS\Session\MetadataManager->createRecordIfNonExisting()	JROOT/libraries/src/Application/CMSApplication.php:152
6	Joomla\CMS\Application\CMSApplication->checkSession()	JROOT/libraries/src/Application/CMSApplication.php:757
5	Joomla\CMS\Application\CMSApplication->loadSession()	JROOT/libraries/src/Application/CMSApplication.php:134
4	Joomla\CMS\Application\CMSApplication->__construct()	JROOT/libraries/src/Application/SiteApplication.php:66
3	Joomla\CMS\Application\SiteApplication->__construct()	JROOT/libraries/src/Application/CMSApplication.php:343
2	Joomla\CMS\Application\CMSApplication::getInstance()	JROOT/libraries/src/Factory.php:140
1	Joomla\CMS\Factory::getApplication()	JROOT/index.php:46

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.56 ms After last query: 0.40 ms Query memory: 0.031 MB Memory before query: 1.313 MB Rows returned: 36

SELECT `extension_id` AS `id`,`element` AS `option`,`params`,`enabled`

  FROM `joo_extensions`

  WHERE `type` = 'component'

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_extensions	NULL	ref	extension	extension	82	const	36	100.00	NULL

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
12	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1691
11	JDatabaseDriver->loadObjectList()	JROOT/libraries/src/Component/ComponentHelper.php:423
10	Joomla\CMS\Component\ComponentHelper::Joomla\CMS\Component\{closure}()	Same as call in the line below.
9	call_user_func_array()	JROOT/libraries/src/Cache/Controller/CallbackController.php:173
8	Joomla\CMS\Cache\Controller\CallbackController->get()	JROOT/libraries/src/Component/ComponentHelper.php:431
7	Joomla\CMS\Component\ComponentHelper::load()	JROOT/libraries/src/Component/ComponentHelper.php:497
6	Joomla\CMS\Component\ComponentHelper::getComponents()	JROOT/libraries/src/Component/ComponentHelper.php:44
5	Joomla\CMS\Component\ComponentHelper::getComponent()	JROOT/libraries/src/Component/ComponentHelper.php:103
4	Joomla\CMS\Component\ComponentHelper::getParams()	JROOT/libraries/src/Application/SiteApplication.php:596
3	Joomla\CMS\Application\SiteApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:212
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.26 ms After last query: 0.43 ms Query memory: 0.023 MB Memory before query: 1.346 MB Rows returned: 5

SELECT id, rules

  FROM `joo_viewlevels`

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_viewlevels	NULL	ALL	NULL	NO INDEX KEY COULD BE USED	NULL	NULL	5	100.00	NULL

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
10	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1496
9	JDatabaseDriver->loadAssocList()	JROOT/libraries/src/Access/Access.php:1063
8	Joomla\CMS\Access\Access::getAuthorisedViewLevels()	JROOT/libraries/src/User/User.php:458
7	Joomla\CMS\User\User->getAuthorisedViewLevels()	JROOT/libraries/src/Plugin/PluginHelper.php:310
6	Joomla\CMS\Plugin\PluginHelper::load()	JROOT/libraries/src/Plugin/PluginHelper.php:87
5	Joomla\CMS\Plugin\PluginHelper::getPlugin()	JROOT/libraries/src/Plugin/PluginHelper.php:129
4	Joomla\CMS\Plugin\PluginHelper::isEnabled()	JROOT/libraries/src/Application/SiteApplication.php:606
3	Joomla\CMS\Application\SiteApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:212
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.45 ms After last query: 0.10 ms Query memory: 0.022 MB Memory before query: 1.358 MB Rows returned: 2

SELECT b.id

  FROM joo_usergroups AS a

  LEFT JOIN joo_usergroups AS b 
  ON b.lft <= a.lft 
  AND b.rgt >= a.rgt

  WHERE a.id = 9

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	a	NULL	const	PRIMARY	PRIMARY	4	const	1	100.00	NULL
1	SIMPLE	b	NULL	range	idx_usergroup_nested_set_lookup	idx_usergroup_nested_set_lookup	4	NULL	2	100.00	Using where; Using index

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
11	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1540
10	JDatabaseDriver->loadColumn()	JROOT/libraries/src/Access/Access.php:980
9	Joomla\CMS\Access\Access::getGroupsByUser()	JROOT/libraries/src/Access/Access.php:1095
8	Joomla\CMS\Access\Access::getAuthorisedViewLevels()	JROOT/libraries/src/User/User.php:458
7	Joomla\CMS\User\User->getAuthorisedViewLevels()	JROOT/libraries/src/Plugin/PluginHelper.php:310
6	Joomla\CMS\Plugin\PluginHelper::load()	JROOT/libraries/src/Plugin/PluginHelper.php:87
5	Joomla\CMS\Plugin\PluginHelper::getPlugin()	JROOT/libraries/src/Plugin/PluginHelper.php:129
4	Joomla\CMS\Plugin\PluginHelper::isEnabled()	JROOT/libraries/src/Application/SiteApplication.php:606
3	Joomla\CMS\Application\SiteApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:212
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.82 ms After last query: 0.17 ms Query memory: 0.033 MB Memory before query: 1.380 MB Rows returned: 77

SELECT `folder` AS `type`,`element` AS `name`,`params` AS `params`,`extension_id` AS `id`

  FROM joo_extensions

  WHERE enabled = 1 
  AND type = 'plugin' 
  AND state IN (0,1) 
  AND access IN (1,1,5)

  ORDER BY ordering

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_extensions	NULL	ref	extension	extension	82	const	103	0.60	Using index condition; Using where; Using filesort

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
11	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1691
10	JDatabaseDriver->loadObjectList()	JROOT/libraries/src/Plugin/PluginHelper.php:343
9	Joomla\CMS\Plugin\PluginHelper::Joomla\CMS\Plugin\{closure}()	Same as call in the line below.
8	call_user_func_array()	JROOT/libraries/src/Cache/Controller/CallbackController.php:173
7	Joomla\CMS\Cache\Controller\CallbackController->get()	JROOT/libraries/src/Plugin/PluginHelper.php:348
6	Joomla\CMS\Plugin\PluginHelper::load()	JROOT/libraries/src/Plugin/PluginHelper.php:87
5	Joomla\CMS\Plugin\PluginHelper::getPlugin()	JROOT/libraries/src/Plugin/PluginHelper.php:129
4	Joomla\CMS\Plugin\PluginHelper::isEnabled()	JROOT/libraries/src/Application/SiteApplication.php:606
3	Joomla\CMS\Application\SiteApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:212
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.35 ms After last query: 2.77 ms Query memory: 0.026 MB Memory before query: 1.798 MB Rows returned: 2

SELECT *

  FROM joo_languages

  WHERE published=1

  ORDER BY ordering ASC

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_languages	NULL	ALL	NULL	NO INDEX KEY COULD BE USED	NULL	NULL	2	50.00	Using where; Using filesort

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
10	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1691
9	JDatabaseDriver->loadObjectList()	JROOT/libraries/src/Language/LanguageHelper.php:150
8	Joomla\CMS\Language\LanguageHelper::getLanguages()	JROOT/plugins/system/languagefilter/languagefilter.php:98
7	PlgSystemLanguageFilter->__construct()	JROOT/libraries/src/Plugin/PluginHelper.php:272
6	Joomla\CMS\Plugin\PluginHelper::import()	JROOT/libraries/src/Plugin/PluginHelper.php:182
5	Joomla\CMS\Plugin\PluginHelper::importPlugin()	JROOT/libraries/src/Application/CMSApplication.php:622
4	Joomla\CMS\Application\CMSApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:688
3	Joomla\CMS\Application\SiteApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:212
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.35 ms After last query: 0.12 ms Query memory: 0.023 MB Memory before query: 1.809 MB Rows returned: 4

SELECT `element`,`name`,`client_id`,`extension_id`

  FROM `joo_extensions`

  WHERE `type` = 'language' 
  AND `state` = 0 
  AND `enabled` = 1

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_extensions	NULL	ref	extension	extension	82	const	4	1.25	Using where

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
10	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1691
9	JDatabaseDriver->loadObjectList()	JROOT/libraries/src/Language/LanguageHelper.php:209
8	Joomla\CMS\Language\LanguageHelper::getInstalledLanguages()	JROOT/plugins/system/languagefilter/languagefilter.php:109
7	PlgSystemLanguageFilter->__construct()	JROOT/libraries/src/Plugin/PluginHelper.php:272
6	Joomla\CMS\Plugin\PluginHelper::import()	JROOT/libraries/src/Plugin/PluginHelper.php:182
5	Joomla\CMS\Plugin\PluginHelper::importPlugin()	JROOT/libraries/src/Application/CMSApplication.php:622
4	Joomla\CMS\Application\CMSApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:688
3	Joomla\CMS\Application\SiteApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:212
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 1.62 ms After last query: 7.87 ms Query memory: 0.089 MB Memory before query: 2.013 MB Rows returned: 55

SELECT m.id, m.menutype, m.title, m.alias, m.note, m.path AS route, m.link, m.type, m.level, m.language,`m`.`browserNav`, m.access, m.params, m.home, m.img, m.template_style_id, m.component_id, m.parent_id,e.element as component

  FROM joo_menu AS m

  LEFT JOIN joo_extensions AS e 
  ON m.component_id = e.extension_id

  WHERE m.published = 1 
  AND m.parent_id > 0 
  AND m.client_id = 0

  ORDER BY m.lft

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	m	NULL	range	idx_client_id_parent_id_alias_language	idx_client_id_parent_id_alias_language	5	NULL	65	10.00	Using index condition; Using where; Using filesort
1	SIMPLE	e	NULL	eq_ref	PRIMARY	PRIMARY	4	dobzh_j.m.component_id	1	100.00	Using where

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
23	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1691
22	JDatabaseDriver->loadObjectList()	JROOT/libraries/src/Menu/SiteMenu.php:93
21	Joomla\CMS\Menu\SiteMenu->Joomla\CMS\Menu\{closure}()	Same as call in the line below.
20	call_user_func_array()	JROOT/libraries/src/Cache/Controller/CallbackController.php:173
19	Joomla\CMS\Cache\Controller\CallbackController->get()	JROOT/libraries/src/Menu/SiteMenu.php:101
18	Joomla\CMS\Menu\SiteMenu->load()	JROOT/libraries/src/Menu/AbstractMenu.php:76
17	Joomla\CMS\Menu\AbstractMenu->__construct()	JROOT/libraries/src/Menu/SiteMenu.php:62
16	Joomla\CMS\Menu\SiteMenu->__construct()	JROOT/libraries/src/Menu/AbstractMenu.php:131
15	Joomla\CMS\Menu\AbstractMenu::getInstance()	JROOT/libraries/src/Application/CMSApplication.php:374
14	Joomla\CMS\Application\CMSApplication->getMenu()	JROOT/libraries/src/Application/SiteApplication.php:275
13	Joomla\CMS\Application\SiteApplication->getMenu()	JROOT/libraries/src/Router/SiteRouter.php:64
12	Joomla\CMS\Router\SiteRouter->__construct()	JROOT/libraries/src/Router/Router.php:189
11	Joomla\CMS\Router\Router::getInstance()	JROOT/libraries/src/Application/CMSApplication.php:488
10	Joomla\CMS\Application\CMSApplication::getRouter()	JROOT/libraries/src/Application/SiteApplication.php:405
9	Joomla\CMS\Application\SiteApplication::getRouter()	JROOT/plugins/system/languagefilter/languagefilter.php:130
8	PlgSystemLanguageFilter->onAfterInitialise()	JROOT/libraries/joomla/event/event.php:70
7	JEvent->update()	JROOT/libraries/joomla/event/dispatcher.php:160
6	JEventDispatcher->trigger()	JROOT/libraries/src/Application/BaseApplication.php:108
5	Joomla\CMS\Application\BaseApplication->triggerEvent()	JROOT/libraries/src/Application/CMSApplication.php:623
4	Joomla\CMS\Application\CMSApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:688
3	Joomla\CMS\Application\SiteApplication->initialiseApp()	JROOT/libraries/src/Application/SiteApplication.php:212
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.53 ms After last query: 4.55 ms Query memory: 0.028 MB Memory before query: 2.533 MB Rows returned: 3

SELECT id, home, template, s.params

  FROM joo_template_styles as s

  LEFT JOIN joo_extensions as e 
  ON e.element=s.template 
  AND e.type='template' 
  AND e.client_id=s.client_id

  WHERE s.client_id = 0 
  AND e.enabled = 1

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	s	NULL	ALL	idx_template	NO INDEX KEY COULD BE USED	NULL	NULL	5	20.00	Using where
1	SIMPLE	e	NULL	ref	element_clientid,element_folder_clientid,extension	element_clientid	403	dobzh_j.s.template,const	1	4.43	Using index condition; Using where

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
13	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1691
12	JDatabaseDriver->loadObjectList()	JROOT/libraries/src/Application/SiteApplication.php:488
11	Joomla\CMS\Application\SiteApplication->getTemplate()	JROOT/plugins/system/jsntplframework/libraries/joomlashine/loader.php:33
10	jsn_template_framework_class_loader()	Same as call in the line below.
9	spl_autoload_call()	JROOT/plugins/system/jsntplframework/jsntplframework.php:187
8	PlgSystemJSNTPLFramework->onAfterRoute()	JROOT/libraries/joomla/event/event.php:70
7	JEvent->update()	JROOT/libraries/joomla/event/dispatcher.php:160
6	JEventDispatcher->trigger()	JROOT/libraries/src/Application/BaseApplication.php:108
5	Joomla\CMS\Application\BaseApplication->triggerEvent()	JROOT/libraries/src/Application/CMSApplication.php:1080
4	Joomla\CMS\Application\CMSApplication->route()	JROOT/libraries/src/Application/SiteApplication.php:798
3	Joomla\CMS\Application\SiteApplication->route()	JROOT/libraries/src/Application/SiteApplication.php:218
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.30 ms After last query: 0.39 ms Query memory: 0.024 MB Memory before query: 2.565 MB Rows returned: 1

SELECT manifest_cache

  FROM joo_extensions

  WHERE element LIKE 'jsn_mico_pro'

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_extensions	NULL	range	element_clientid,element_folder_clientid	element_clientid	402	NULL	3	100.00	Using index condition

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
14	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1730
13	JDatabaseDriver->loadResult()	JROOT/plugins/system/jsntplframework/libraries/joomlashine/helper.php:122
12	JSNTplHelper::getManifestCache()	JROOT/plugins/system/jsntplframework/libraries/joomlashine/helper.php:217
11	JSNTplHelper::getTemplateVersion()	JROOT/plugins/system/jsntplframework/libraries/joomlashine/loader.php:35
10	jsn_template_framework_class_loader()	Same as call in the line below.
9	spl_autoload_call()	JROOT/plugins/system/jsntplframework/jsntplframework.php:187
8	PlgSystemJSNTPLFramework->onAfterRoute()	JROOT/libraries/joomla/event/event.php:70
7	JEvent->update()	JROOT/libraries/joomla/event/dispatcher.php:160
6	JEventDispatcher->trigger()	JROOT/libraries/src/Application/BaseApplication.php:108
5	Joomla\CMS\Application\BaseApplication->triggerEvent()	JROOT/libraries/src/Application/CMSApplication.php:1080
4	Joomla\CMS\Application\CMSApplication->route()	JROOT/libraries/src/Application/SiteApplication.php:798
3	Joomla\CMS\Application\SiteApplication->route()	JROOT/libraries/src/Application/SiteApplication.php:218
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.35 ms After last query: 2.22 ms Query memory: 0.023 MB Memory before query: 2.591 MB Rows returned: 1

SELECT COUNT(*)

  FROM joo_extensions

  WHERE type = 'component' 
  AND element = 'com_sh404sef'

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_extensions	NULL	ref	element_clientid,element_folder_clientid,extension	element_clientid	402	const	1	10.00	Using where

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
12	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1730
11	JDatabaseDriver->loadResult()	JROOT/plugins/system/jsntplframework/libraries/joomlashine/utils.php:1166
10	JSNTplUtils->checkSH404SEF()	JROOT/plugins/system/jsntplframework/includes/core/jsntplframework.php:36
9	JSNTPLFramework::initial()	JROOT/plugins/system/jsntplframework/jsntplframework.php:191
8	PlgSystemJSNTPLFramework->onAfterRoute()	JROOT/libraries/joomla/event/event.php:70
7	JEvent->update()	JROOT/libraries/joomla/event/dispatcher.php:160
6	JEventDispatcher->trigger()	JROOT/libraries/src/Application/BaseApplication.php:108
5	Joomla\CMS\Application\BaseApplication->triggerEvent()	JROOT/libraries/src/Application/CMSApplication.php:1080
4	Joomla\CMS\Application\CMSApplication->route()	JROOT/libraries/src/Application/SiteApplication.php:798
3	Joomla\CMS\Application\SiteApplication->route()	JROOT/libraries/src/Application/SiteApplication.php:218
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.38 ms After last query: 0.33 ms Query memory: 0.025 MB Memory before query: 2.617 MB Rows returned: 1

SELECT `extension_id` AS `id`,`element` AS `option`,`params`,`enabled`

  FROM `joo_extensions`

  WHERE `type` = 'library' 
  AND `element` = 'joomla'

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_extensions	NULL	ref	element_clientid,element_folder_clientid,extension	extension	484	const,const	1	100.00	NULL

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
15	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1652
14	JDatabaseDriver->loadObject()	JROOT/libraries/src/Helper/LibraryHelper.php:167
13	Joomla\CMS\Helper\LibraryHelper::Joomla\CMS\Helper\{closure}()	Same as call in the line below.
12	call_user_func_array()	JROOT/libraries/src/Cache/Controller/CallbackController.php:173
11	Joomla\CMS\Cache\Controller\CallbackController->get()	JROOT/libraries/src/Helper/LibraryHelper.php:175
10	Joomla\CMS\Helper\LibraryHelper::loadLibrary()	JROOT/libraries/src/Helper/LibraryHelper.php:43
9	Joomla\CMS\Helper\LibraryHelper::getLibrary()	JROOT/libraries/src/Helper/LibraryHelper.php:90
8	Joomla\CMS\Helper\LibraryHelper::getParams()	JROOT/libraries/src/Version.php:321
7	Joomla\CMS\Version->getMediaVersion()	JROOT/libraries/src/Factory.php:778
6	Joomla\CMS\Factory::createDocument()	JROOT/libraries/src/Factory.php:234
5	Joomla\CMS\Factory::getDocument()	JROOT/libraries/src/Application/WebApplication.php:1113
4	Joomla\CMS\Application\WebApplication->loadDocument()	JROOT/libraries/src/Application/SiteApplication.php:133
3	Joomla\CMS\Application\SiteApplication->dispatch()	JROOT/libraries/src/Application/SiteApplication.php:233
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 1.05 ms After last query: 0.18 ms Query memory: 0.005 MB Memory before query: 2.607 MB

UPDATE `joo_extensions`

  SET `params` = '{\"mediaversion\":\"bc2f90d0835ae35fd6dfce3a8c7dce30\"}'

  WHERE `type` = 'library' 
  AND `element` = 'joomla'

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	UPDATE	joo_extensions	NULL	range	element_clientid,element_folder_clientid,extension	extension	484	const,const	1	100.00	Using where

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
10	JDatabaseDriverMysqli->execute()	JROOT/libraries/src/Helper/LibraryHelper.php:117
9	Joomla\CMS\Helper\LibraryHelper::saveParams()	JROOT/libraries/src/Version.php:372
8	Joomla\CMS\Version->setMediaVersion()	JROOT/libraries/src/Version.php:331
7	Joomla\CMS\Version->getMediaVersion()	JROOT/libraries/src/Factory.php:778
6	Joomla\CMS\Factory::createDocument()	JROOT/libraries/src/Factory.php:234
5	Joomla\CMS\Factory::getDocument()	JROOT/libraries/src/Application/WebApplication.php:1113
4	Joomla\CMS\Application\WebApplication->loadDocument()	JROOT/libraries/src/Application/SiteApplication.php:133
3	Joomla\CMS\Application\SiteApplication->dispatch()	JROOT/libraries/src/Application/SiteApplication.php:233
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.95 ms After last query: 1.91 ms Query memory: 0.030 MB Memory before query: 2.766 MB Rows returned: 36

SELECT `id`,`name`,`rules`,`parent_id`

  FROM `joo_assets`

  WHERE `name` IN ('root.1','com_admin','com_ajax','com_akeeba','com_associations','com_banners','com_cache','com_categories','com_checkin','com_config','com_contact','com_content','com_contenthistory','com_cpanel','com_fields','com_finder','com_formmaker','com_imageshow','com_installer','com_jce','com_joomlaupdate','com_languages','com_login','com_mailto','com_media','com_menus','com_messages','com_modules','com_newsfeeds','com_plugins','com_postinstall','com_redirect','com_search','com_tags','com_templates','com_users','com_wrapper')

Explain

id	select_type	table	partitions	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	joo_assets	NULL	range	idx_asset_name	idx_asset_name	202	NULL	37	100.00	Using index condition

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
18	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1691
17	JDatabaseDriver->loadObjectList()	JROOT/libraries/src/Access/Access.php:429
16	Joomla\CMS\Access\Access::preloadComponents()	JROOT/libraries/src/Access/Access.php:213
15	Joomla\CMS\Access\Access::preload()	JROOT/libraries/src/Access/Access.php:531
14	Joomla\CMS\Access\Access::getAssetRules()	JROOT/libraries/src/Access/Access.php:183
13	Joomla\CMS\Access\Access::check()	JROOT/libraries/src/User/User.php:398
12	Joomla\CMS\User\User->authorise()	JROOT/components/com_content/models/article.php:55
11	ContentModelArticle->populateState()	JROOT/libraries/src/MVC/Model/BaseDatabaseModel.php:435
10	Joomla\CMS\MVC\Model\BaseDatabaseModel->getState()	JROOT/components/com_content/models/article.php:248
9	ContentModelArticle->hit()	JROOT/components/com_content/controller.php:109
8	ContentController->display()	JROOT/libraries/src/MVC/Controller/BaseController.php:710
7	Joomla\CMS\MVC\Controller\BaseController->execute()	JROOT/components/com_content/content.php:43
6	require_once JROOT/components/com_content/content.php	JROOT/libraries/src/Component/ComponentHelper.php:382
5	Joomla\CMS\Component\ComponentHelper::executeComponent()	JROOT/libraries/src/Component/ComponentHelper.php:357
4	Joomla\CMS\Component\ComponentHelper::renderComponent()	JROOT/libraries/src/Application/SiteApplication.php:194
3	Joomla\CMS\Application\SiteApplication->dispatch()	JROOT/libraries/src/Application/SiteApplication.php:233
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.83 ms After last query: 0.61 ms Query memory: 0.036 MB Memory before query: 2.826 MB Rows returned: 30

Duplicate queries: #22 #25 #31 #34 #43 #46 #65 #68 #75 #78 #83 #86 #99 #102 #160 #168 #176 #183 #191 #197

SHOW FULL COLUMNS 
  FROM `joo_content`

Explain

EXPLAIN not possible on query: SHOW FULL COLUMNS FROM `joo_content`

Profile

No SHOW PROFILE (maybe because there are more than 100 queries)

Call Stack

#	Caller	File and line number
16	JDatabaseDriverMysqli->execute()	JROOT/libraries/joomla/database/driver.php:1691
15	JDatabaseDriver->loadObjectList()	JROOT/libraries/joomla/database/driver/mysqli.php:430
14	JDatabaseDriverMysqli->getTableColumns()	JROOT/libraries/src/Table/Table.php:245
13	Joomla\CMS\Table\Table->getFields()	JROOT/libraries/src/Table/Table.php:164
12	Joomla\CMS\Table\Table->__construct()	JROOT/libraries/src/Table/Content.php:39
11	Joomla\CMS\Table\Content->__construct()	JROOT/libraries/src/Table/Table.php:312
10	Joomla\CMS\Table\Table::getInstance()	JROOT/components/com_content/models/article.php:250
9	ContentModelArticle->hit()	JROOT/components/com_content/controller.php:109
8	ContentController->display()	JROOT/libraries/src/MVC/Controller/BaseController.php:710
7	Joomla\CMS\MVC\Controller\BaseController->execute()	JROOT/components/com_content/content.php:43
6	require_once JROOT/components/com_content/content.php	JROOT/libraries/src/Component/ComponentHelper.php:382
5	Joomla\CMS\Component\ComponentHelper::executeComponent()	JROOT/libraries/src/Component/ComponentHelper.php:357
4	Joomla\CMS\Component\ComponentHelper::renderComponent()	JROOT/libraries/src/Application/SiteApplication.php:194
3	Joomla\CMS\Application\SiteApplication->dispatch()	JROOT/libraries/src/Application/SiteApplication.php:233
2	Joomla\CMS\Application\SiteApplication->doExecute()	JROOT/libraries/src/Application/CMSApplication.php:195
1	Joomla\CMS\Application\CMSApplication->execute()	JROOT/index.php:49

[Add xdebug.file_link_format directive to your php.ini file to have links for files.]

Query Time: 0.42 ms After last query: 1.06 ms Query memory: 0.034 MB Memory before query: 2.958 MB Rows returned: 1